Stones featured in every match as City topped their group, with Jesus netting a hat-trick in the 6-0 win over Shakhtar Donetsk.
The Brazilian striker has managed to score 16 goals in 33 appearances so far this term, despite largely serving as a backup striker behind Sergio Aguero, while Stones has been a vital cog in the City defence once again.
There was some good news for Pep Guardiola ahead of Wednesday's match in Gelsenkirchen though, as club captain Vincent Kompany and left-back Benjamin Mendy trained for the second successive day following their latest spells on the sidelines.
Mendy was still deemed not ready for a return to action so he hasn't made Guardiola's 20-man squad for the trip to Germany, but Kompany has been included this time.
The Belgium international has not featured since his troublesome calves flared up again during last month's 2-1 win over Liverpool, while Mendy suffered swelling following his return from knee surgery against Burton Albion in the semi-finals of the EFL Cup.
City face Chelsea in the final of the latter competition at Wembley on Sunday, as they continue to chase an unprecedented quadruple.
Guardiola's men are currently second in the Premier League and favourites to lift the Champions League for the first time in their history come May.
The start of 2019 has seen City recover from an inconsistent Christmas period, winning 11 of their 12 fixtures across all competitions.
Kevin De Bruyne