Leading marksmen Pierre-Emerick Aubameyang and Robert Lewandowski provide the firepower, having netted 61 goals between them in the 2016-17 campaign.
Bayern also have Manuel Neuer, Mats Hummels and Thiago Alcantara in a starting XI voted for by the fans.
Dortmund, meanwhile, are represented by Lukasz Piszczek and Ousmane Dembele.
Naby Keita makes the midfield, with the RB Leipzig star interesting Liverpool in a possible £50 million deal.
In the wider squad, retiring Bayern skipper Philipp Lahm makes the bench, alongside team-mate Arjen Robben and free-scoring Koln striker Anthony Modeste.
The updated ratings have also been released by FIFA 17, with Lewandowski the leading performer on 98, one ahead of Allianz Arena colleague Neuer and three clear of Aubameyang.
Excitement can now start to build towards the release of FIFA 18, which EA Sports will deliver at some point early in the 2017-18 campaign.