The Bundesliga champions will take on Mirko Slomka's side in the next round of the competition after seeing off Aalen 4-1 in round two.
Elsewhere, current league leaders and last season's beaten finalists Bayern Munich face the short trip to take on Augsburg in a Bavarian derby match, after they thrashed Kaiserslauten 4-0 in the second round.
In the other significant ties, 2011 winners Schalke play host to Mainz, Wolfsburg take on Bayer Leverkusen and Fortuna Dusseldorf travel to face Hessenliga outfit Kickers Offenbach.
DFB-Pokal Round Three draw in full:
|K Offenbach||-||F Dusseldorf|